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Bioinformatics Research and Applications [electronic resource] :6th International Symposium, ISBRA 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings /

Contributor(s): Borodovsky, Mark [editor.] | Gogarten, Johann Peter [editor.] | Przytycka, Teresa M [editor.] | Rajasekaran, Sanguthevar [editor.] | SpringerLink (Online service).
Material type: materialTypeLabelBookSeries: Lecture Notes in Computer Science: 6053Publisher: Berlin, Heidelberg : Springer Berlin Heidelberg, 2010.Description: XII, 253 p. 80 illus. online resource.Content type: text Media type: computer Carrier type: online resourceISBN: 9783642130786.Subject(s): Life sciences | Algorithms | Database management | Data mining | Information storage and retrieval | Life Sciences | Life Sciences, general | Database Management | Information Systems Applications (incl. Internet) | Information Storage and Retrieval | Algorithm Analysis and Problem Complexity | Data Mining and Knowledge DiscoveryOnline resources: Click here to access online
Contents:
Tracing the Early Cell Divisions of Mouse Embryos by Single Cell RNA-Seq -- Successes and Failures of Elegant Algorithms in Computational Biology -- Modeling without Borders: Creating and Annotating VCell Models Using the Web -- Touring Protein Space with Matt -- Fixed-Parameter Algorithm for General Pedigrees with a Single Pair of Sites -- Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model -- Human Genome Annotation -- Extensions and Improvements to the Chordal Graph Approach to the Multi-state Perfect Phylogeny Problem -- Analysis of Gene Interactions Using Restricted Boolean Networks and Time-Series Data -- Residue Contexts: Non-sequential Protein Structure Alignment Using Structural and Biochemical Features -- Essential Proteins Discovery from Weighted Protein Interaction Networks -- Identifying Differentially Abundant Metabolic Pathways in Metagenomic Datasets -- A Novel Approach for Compressing Phylogenetic Trees -- Structure of Proximal and Distant Regulatory Elements in the Human Genome -- Combinatorics in Recombinational Population Genomics -- Uncovering Hidden Phylogenetic Consensus -- An Agglomerate Algorithm for Mining Overlapping and Hierarchical Functional Modules in Protein Interaction Networks -- Fast Protein Structure Alignment -- Predicting and Analyzing Cellular Networks -- A Consensus Tree Approach for Reconstructing Human Evolutionary History and Detecting Population Substructure -- Inferring Evolutionary Scenarios for Protein Domain Compositions -- Local Structural Alignment of RNA with Affine Gap Model -- Fast Computation of the Exact Hybridization Number of Two Phylogenetic Trees -- “Master-Slave” Biological Network Alignment -- Deciphering Transcription Factor Binding Patterns from Genome-Wide High Density ChIP-chip Tiling Array Data -- The Expected Fitness Cost of a Mutation Fixation under the One-Dimensional Fisher Model.
In: Springer eBooks
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Tracing the Early Cell Divisions of Mouse Embryos by Single Cell RNA-Seq -- Successes and Failures of Elegant Algorithms in Computational Biology -- Modeling without Borders: Creating and Annotating VCell Models Using the Web -- Touring Protein Space with Matt -- Fixed-Parameter Algorithm for General Pedigrees with a Single Pair of Sites -- Analysis of Temporal-spatial Co-variation within Gene Expression Microarray Data in an Organogenesis Model -- Human Genome Annotation -- Extensions and Improvements to the Chordal Graph Approach to the Multi-state Perfect Phylogeny Problem -- Analysis of Gene Interactions Using Restricted Boolean Networks and Time-Series Data -- Residue Contexts: Non-sequential Protein Structure Alignment Using Structural and Biochemical Features -- Essential Proteins Discovery from Weighted Protein Interaction Networks -- Identifying Differentially Abundant Metabolic Pathways in Metagenomic Datasets -- A Novel Approach for Compressing Phylogenetic Trees -- Structure of Proximal and Distant Regulatory Elements in the Human Genome -- Combinatorics in Recombinational Population Genomics -- Uncovering Hidden Phylogenetic Consensus -- An Agglomerate Algorithm for Mining Overlapping and Hierarchical Functional Modules in Protein Interaction Networks -- Fast Protein Structure Alignment -- Predicting and Analyzing Cellular Networks -- A Consensus Tree Approach for Reconstructing Human Evolutionary History and Detecting Population Substructure -- Inferring Evolutionary Scenarios for Protein Domain Compositions -- Local Structural Alignment of RNA with Affine Gap Model -- Fast Computation of the Exact Hybridization Number of Two Phylogenetic Trees -- “Master-Slave” Biological Network Alignment -- Deciphering Transcription Factor Binding Patterns from Genome-Wide High Density ChIP-chip Tiling Array Data -- The Expected Fitness Cost of a Mutation Fixation under the One-Dimensional Fisher Model.

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